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dc.creatorBartlett, Arianna P.
dc.date.accessioned2020-07-22T19:51:51Z
dc.date.available2020-07-22T19:51:51Z
dc.date.created2018-05
dc.date.issued2018-04-25
dc.date.submittedMay 2018
dc.identifier.urihttps://hdl.handle.net/1969.1/188516
dc.description.abstractAnnelida is a diverse phylum that includes leeches, earthworms, polychaetes, and several model species like Platynereis dumerilii (clam worm), Helobdella robusta (leech), and Capitella capitata (polychaete worm), that are important in the fields of evolutionary developmental biology, neurobiology, ecology, evolution and phylogenomics. Our research seeks to identify and characterize gene annotations from transcriptome data collected from previously unevaluated amphinomid clades, Euphrosinidae (Euphrosine capensis), and Archinominae (Chloeia pinnata), and to supplement knowledge of Amphinominae (Paramphinome jeffreysii and Hermodice carunculata). Amphinomida remains understudied in terms of whole transcriptome analyses relative to more well studied annelids such as Capitella teleta and Helobdella robusta. To make transcriptomic comparisons, orthologous proteins within the amphinomids and a Lophotrochozoan database were identified and annotated for downstream analysis of phylogenomic relationships and exploration of biological pathways. Expanding transcriptomic analyses from previously unevaluated clades in Amphinomida may provide key evolutionary insights into the biological, physiological and morphological diversity of Annelida.en
dc.format.mimetypeapplication/pdf
dc.subjectAnnelidaen
dc.subjectAmphinomidaen
dc.subjectTranscriptomicsen
dc.subjectBlast2Goen
dc.subjectAnnotationen
dc.subjectOrthologousen
dc.subjectLophotrochozoaen
dc.titleComparative Transcriptomics of Amphinomida (Annelida)en
dc.typeThesisen
thesis.degree.departmentMarine Biologyen
thesis.degree.disciplineMarine Biologyen
thesis.degree.grantorUndergraduate Research Scholars Programen
thesis.degree.nameBSen
thesis.degree.levelUndergraduateen
dc.contributor.committeeMemberLabonté, Jessica
dc.contributor.committeeMemberBorda, Elizabeth
dc.type.materialtexten
dc.date.updated2020-07-22T19:51:52Z


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