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dc.contributor.advisorApplegate, Brian E
dc.creatorZambrano, Felipe De Jesus
dc.date.accessioned2019-01-18T19:22:16Z
dc.date.available2019-01-18T19:22:16Z
dc.date.created2015-08
dc.date.issued2015-08-12
dc.date.submittedAugust 2015
dc.identifier.urihttps://hdl.handle.net/1969.1/174197
dc.description.abstractI propose and demonstrate the groundwork for developing a fluorescence microscopy imaging system by which a Digital Micromirror Device (DMD) and an axicon can be used in combination for remote refocusing of the focal plane while providing high resolution depth profiles, or Axial scans (A-scans), comparable to Optical Coherence Tomography (OCT). Although OCT imaging systems can capture large depth A-scans to buildup high-resolution volumetric images, the information detected by these systems is entirely dependent on the coherent back-scattered light from a sample’s structure. Hence, OCT systems are unable to determine a structure’s molecular information; however, such information can be acquired from fluorescence systems. Furthermore, unlike conventional spherical lenses, which have a short depth of focus, the length in which the focal spot begins to diverge to a size greater than √2 its spot size, conical lenses like the axicon create a long and narrow depth of focus surrounded by annular rings of lower intensity. Essentially, this focal line, or Extended Depth of Focus (EDF), achieves the same axial resolution as a spherical lens, but has a longer axial length for acquiring A-scans. As a result, a DMD is used to manipulate the size and shape of an illuminated beam pattern, a thin annulus, into the axicon in order to acquire the sample’s entire depth profile point-by-point within the EDF. This proposed technique is supported by the point spread function (PSF) measurements from multiple 10 um diameter-sized polystyrene microspheres (fluorescent 540/560 nm), which agree with the mathematical model used in determining the system’s axial resolution.en
dc.format.mimetypeapplication/pdf
dc.language.isoen
dc.subjectAxiconen
dc.subjectDigital Micromirror Deviceen
dc.subjectFluorescence Microscopyen
dc.subjectExtended Depth of Focusen
dc.subjecten
dc.titleA Tunable Extended Depth of Focus Microscope Through Beam Shape Modulation into an Axicon Lensen
dc.typeThesisen
thesis.degree.departmentBiomedical Engineeringen
thesis.degree.disciplineBiomedical Engineeringen
thesis.degree.grantorTexas A & M Universityen
thesis.degree.nameMaster of Scienceen
thesis.degree.levelMastersen
dc.contributor.committeeMemberJo, Javier A
dc.contributor.committeeMemberMaitland, Kristen C
dc.contributor.committeeMemberLenox, Mark W
dc.type.materialtexten
dc.date.updated2019-01-18T19:22:16Z
local.etdauthor.orcid0000-0002-5487-1413


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