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dc.contributor.advisorZhou, Yubin
dc.creatorHe, Lian
dc.date.accessioned2019-01-17T19:17:55Z
dc.date.available2020-05-01T06:23:10Z
dc.date.created2018-05
dc.date.issued2018-05-03
dc.date.submittedMay 2018
dc.identifier.urihttps://hdl.handle.net/1969.1/173553
dc.description.abstractCalcium (Ca^2+) acts as a universal second messenger to regulate a myriad of biological processes, including gene expression, cell metabolism, lymphocyte activation and cell growth. In non-excitable cells such as cells of the immune system, store-operated Ca2+ entry (SOCE) through the Ca^2+ release-activated Ca^2+ (CRAC) channel is primarily coordinated by two components: the ER-resident Ca2+ sensor protein stromal interaction molecule 1 (STIM1) and the pore subunit ORAI1 on the plasma membrane. To meet the demand of chemical biology tools for remote control of Ca^2+ signaling in mammals with high precision, we set out to engineer photo-sensitivities into either STIM1 (OptoSTIM1) or ORAI1 (OptoORAI1) to generate photoswitchable CRAC channels. OptoSTIM1 was engineered by combining STIM1-ORAI1 activation region (SOAR) of STIM1 with the light-reactive light-oxygen-voltage (LOV2) domain. The light-inducible effects were assessed by Ca^2+ influx with genetically-encoded calcium indicators, degrees of NFAT translocation, and expression levels of Ca^2+/NFAT downstream targets. To generate OptoORAI1, LOV2 was inserted into the loop region of ORAI1 and thus acted as an allosteric switch to induce structural rearrangement within ORAI1 to open the channel. Through several rounds of randomized screening and optimization, we identified one OptoORAI1 variant exhibiting a high dynamic change in the light-induced Ca^2+ response without noticeable dark activity. In parallel, to enable more flexible and versatile optogenetic engineering of proteins, we developed a series of engineered LOV2 variants (cpLOV2) through circular permutation. cpLOV2 creates new interfaces to cage protein function, thus enabling broader applications of LOV2-based optogenetic tools to targets that are otherwise not photo-controllable. In summary, our single-component OptoCRAC tools provide new opportunities to remotely and precisely control the Ca^2+ signaling at high spatial and temporal resolution. We have successfully demonstrated the use of OptoCRAC to photo-tune Ca^2+/NFAT-dependent gene expression, as well as transcriptional reprogramming of endogenous genes when coupled with the CRISPR/Cas9 genome editing technique.en
dc.format.mimetypeapplication/pdf
dc.language.isoen
dc.subjectCRAC channelen
dc.subjectcalcium signalingen
dc.subjectOptogeneticsen
dc.subjectOptoSTIMen
dc.subjectOptoORAIen
dc.titleEngineered CRAC Channel for Optical Control of Calcium Signalingen
dc.typeThesisen
thesis.degree.departmentBiomedical Sciencesen
thesis.degree.disciplineMedical Sciencesen
thesis.degree.grantorTexas A & M Universityen
thesis.degree.nameDoctor of Philosophyen
thesis.degree.levelDoctoralen
dc.contributor.committeeMemberZhu, Michael X.
dc.contributor.committeeMemberReiner, David J.
dc.contributor.committeeMemberWang, Fen
dc.type.materialtexten
dc.date.updated2019-01-17T19:17:55Z
local.embargo.terms2020-05-01
local.etdauthor.orcid0000-0002-6883-2984


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