Browsing by Author "Sze, Sing-Hoi"
Now showing items 1-20 of 41
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Radulović, Željko M; Kim, Tae K; Porter, Lindsay M; Sze, Sing-Hoi; Lewis, Lauren; Mulenga, Albert (BMC Genomics, 2014)
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Cheng, Yuan-Teng (2009-05-15)With the help of the internet, teaching is not constrained in the traditional classroom pedagogy; the instructors can put the course material on the website and allow the students go on to the course webpage as an alternative ...
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Yi, Gang Man (2009-05-15)An increasing body of literature shows that genomes of eukaryotes can contain clusters of functionally related genes. Most approaches to identify gene clusters utilize microarray data or metabolic pathway databases to find ...
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Yi, Gang Man (2012-07-16)The increased availability of data in biological databases provides many opportunities for understanding biological processes through these data. As recent attention has shifted from sequence analysis to higher-level ...
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Sze, Chin Ngai (Texas A&M University, 2007-04-25)Along the history of Very Large Scale Integration (VLSI), we have successfully scaled down the size of transistors, scaled up the speed of integrated circuits (IC) and the number of transistors in a chip - these are just ...
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Lam, Tak Cheung (2009-05-15)The prevalence of digital information management in an open network has driven the need to maintain balance between anonymity, authenticity and accountability (AAA). Anonymity allows a principal to hide its identity from ...
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Li, Jingjia (2016-05-09)Maize is a leading food, feed and bioenergy crop in the U.S. and the world, while grain yield is the most important to all cereals, including maize, wheat, rice and sorghum. Since genes are the keys to comprehensively ...
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Childs, Kevin (Texas A&M University, 2005-02-17)There are three main categories of algorithms for identifying small transcription regulatory sequences in the promoters of genes, phylogenetic comparison, expectation maximization and combinatorial. For convenience, the ...
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Comparative Analysis of Error Correction in High-throughput Sequences for the Human Gut Microbiome Purwosumarto, NathanWith the development of high-throughput sequencing tools over the last few decades, the sequencing of genomic data at a large scale at a relatively low cost has drastically revolutionized the field of bioinformatics. ...
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Fan, Jia-Hao (2013-07-23)Both the maximum agreement forest problem and the multicut on trees problem are NP-hard, thus cannot be solved efficiently if P /=NP. The maximum agreement forest problem was motivated in the study of evolution trees in ...
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Luo, Ping (2010-01-14)The k-path problem is to find a simple path of length k. This problem is NP-complete and has applications in bioinformatics for detecting signaling pathways in protein interaction networks and for biological subnetwork ...
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Katiyar, Ashish (2017-04-10)Understanding the heterogeneous nature of cancer tissue is a very important problem in cancer research. It can give insights into the cause of disease, its progression and explain induced drug resistance. There are two ...
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Yang, Qingwu (2009-05-15)Biological patterns are widely used for identifying biologically interesting regions within macromolecules, classifying biological objects, predicting functions and studying evolution. Good pattern finding algorithms will ...
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Bai, Gali (2020-07-23)This study was aimed at finding genetic markers or genes that are associated with ear traits important to maize by genome-wide association study (GWAS) based on the USDA maize GWAS panel consisting of diverse inbred lines ...
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Fu, Shuhua (2015-05-13)As the advance in high-throughput sequencing enables the generation of large volumes of genomic information, it provides researchers the opportunity to study non-model organisms even in the absence of a fully sequenced ...
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Zhao, Wentao (2009-05-15)Biological phenomena in the cells can be explained in terms of the interactions among biological macro-molecules, e.g., DNAs, RNAs and proteins. These interactions can be modeled by genetic regulatory networks (GRNs). This ...
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Wang, Jixin; Adelson, David L; Yilmaz, Ahmet; Sze, Sing-Hoi; Jin, Yuan; Zhu, James J (BMC Genomics, 2005)
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Fu, Shuhua; Tarone, Aaron; Sze, Sing-Hoi (BMC Genomics, 2015)
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Jung, Jeesun (Texas A&M University, 2005-11-01)As a large number of single nucleotide polymorphisms (SNPs) and microsatellite markers are available, high resolution mapping employing multiple markers or multiple allele markers is an important step to identify quantitative ...
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Qiu, Chenxi; Erinne, Olivia; Dave, Jui; Cui, Ping; Jin, Huiyan; Muthukrishnan, Nandhini; Tang, Leung; Sabareesh Ganesh Babu; Lam, Kenny; Vandeventer, Paul; Strohner, Ralf; Jan Van den Brulle; Sze, Sing-Hoi; Kaplan, Craig (PLoS Genetics, 2016)