%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
%  New template code for TAMU Theses and Dissertations starting Fall 2012.  
%  For more info about this template or the 
%  TAMU LaTeX User's Group, see http://www.howdy.me/.
%
%  Author: Wendy Lynn Turner 
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\documentclass[12pt]{report}
\usepackage[letterpaper]{geometry}
\geometry{verbose,tmargin=1.25in,bmargin=1.25in,lmargin=1.4in,rmargin=1.15in}
 \usepackage{tocloft}
 \usepackage[rm, tiny,center, compact]{titlesec}
 \usepackage{indentfirst}
 \usepackage{etoolbox}
\usepackage{tocvsec2}
 \usepackage[titletoc]{appendix}
 \usepackage{appendix}
 \usepackage{tamuconfig}
 \usepackage[doublespacing]{setspace}
\usepackage{framed}
\usepackage{array}
\usepackage{graphicx}
\usepackage{epstopdf}
\usepackage{float} 
\usepackage{tocloft}
\usepackage{subfigure}
\usepackage{amsmath}
\usepackage{amsfonts}
\usepackage{amssymb}
\usepackage{amsbsy}
\usepackage{natbib}
\usepackage{rotating}
\usepackage[font=singlespacing]{caption}
\usepackage[justification=centering]{caption}
\usepackage[labelsep=period]{caption}
\renewcommand{\figurename}{Fig.}






% Added to fix issues with pdf searching in some versions of LaTeX
%\usepackage[T1]{fontenc}\usepackage{lmodern}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

% Hyperref setup below.  You should be able to get away with using uncommenting just the first line.
%\usepackage[hidelinks]{hyperref}

% if \usepackage[hidelinks]{hyperref} doesn't work try this.
% \usepackage{hyperref}  % Hidelinks is an option that removes link visiability.  TAMU Thesis Offices prefers to not see the links. But often doesn't work.  
% 
% \hypersetup{
%     colorlinks=true,
%     linkcolor=black,
%     citecolor=black,
%     filecolor=black,
%     urlcolor=black,
% }
%%%%%%%  End of hyperref setup.  One of these two options should work, but my motto with hyperref is when in doubt, comment it out!
%%%%%%%%%  This hopefully fixes the problem with vertical spacing of section headings at the top of the page..
% \preto\section{%
% \ifnum\value{section}>0\addtocontents{toc}{\vskip-6pt}\fi
% }
% \preto\subsection{%
% \ifnum\value{subsection}=0\addtocontents{toc}{\vskip-6pt}\fi
% \ifnum\value{subsection}>0\addtocontents{toc}{\vskip-6pt}\fi
% } 
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\begin{document}
\renewcommand{\tamumanuscripttitle}{Non-destructive testing of subsurface infrastructure using induced polarization and electrical resistivity imaging}
\renewcommand{\tamupapertype}{Dissertation}
\renewcommand{\tamufullname}{Stacey Elizabeth Tucker}
\renewcommand{\tamudegree}{Doctor of Philosophy}
\renewcommand{\tamuchairone}{Jean-Louis Briaud}
% Uncomment out the next line if you have co-chairs.  You will also need to edit the titlepage.tex file.
\newcommand{\tamuchairtwo}{Stefan Hurlebaus}
\renewcommand{\tamumemberone}{Charles Aubeny}
\newcommand{\tamumembertwo}{Mark Everett}
%\newcommand{\tamumemberthree}{Committee Member3}
\renewcommand{\tamudepthead}{Robin Autenrieth}
\renewcommand{\tamugradmonth}{August}
\renewcommand{\tamugradyear}{2013}
\renewcommand{\tamudepartment}{Zachry Department of Civil Engineering}


\include{titlepage} % This is simply a file that formats and adds your titlepage, please do not edit this unless you have a specific need. .
\include{abstract}
\include{dedication}
\include{acknowledgements}
\include{nomenclature}

\include{lists}  % This is simply a file that formats and adds your toc, lof, and lot, please do not edit this unless you have a specific need. .
\include{Introduction}
\include{LitReview}
\include{Models}
\include{Experimentation}
\include{Reliability}
\include{Validation}
\include{Pipe}
\include{ScientificContributions}
\include{Conclusions}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\let\oldbibitem\bibitem
\renewcommand{\bibitem}{\setlength{\itemsep}{0pt}\oldbibitem}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\include{bibliography}
 \include{appendices}


\end{document}
