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dc.contributor.advisorRaushel, Frank M
dc.creatorPark, Min Sun
dc.date.accessioned2006-10-30T23:32:03Z
dc.date.available2006-10-30T23:32:03Z
dc.date.created2005-08
dc.date.issued2006-10-30
dc.identifier.urihttps://hdl.handle.net/1969.1/4386
dc.description.abstractThe PepQ prolidase from Escherichia coli catalyzes the hydrolysis of dipeptide substrates with proline residues at the C-terminus. The PepQ gene has been cloned, overexpressed and the enzyme purified to homogeneity. The kcat and kcat/Km values for the hydrolysis of Met-Pro are 109 s-1 and 8.4 x 105 M-1 s-1, respectively. The enzyme also catalyzes the stereoselective hydrolysis of organophosphate triesters and organophosphonate diesters. A series of 16 organophosphate triesters with a p-nitrophenyl leaving group was assessed as substrates for this enzyme. The SP-enantiomer of methyl phenyl p-nitrophenyl phosphate was hydrolyzed with a kcat of 36 min-1 and a kcat/Km of 710 M-1 s-1. The corresponding RP-enantiomer was more slowly hydrolyzed with a kcat of 0.4 min-1 and a kcat/Km of 11 M-1 s-1. The PepQ prolidase can be utilized for the kinetic resolution of racemic phosphate esters. The PepQ prolidase was shown to hydrolyze the p-nitrophenyl analogs of the nerve agents GB (sarin), GD (soman), GF, and VX. The pH-rate profiles for the wild-type E. coli prolidase using proline dipeptides as substrates were obtained. The roles of H346, H228, and E384 in the enzyme catalytic mechanism were also investigated by obtaining the pH-rate profiles for the mutants H346N, H228N, and E384Q. In an effort to clarify the mechanistic role of the interaction of the α-amino group of Xaa-Pro with metal at the enzyme active site, comparisons of the hydrolytic activity for Ala-Pro and 1-(1-oxopropyl)-L-proline, in which a hydrogen replaces the α-amino group of Ala-Pro, were performed.en
dc.format.extent679486 bytesen
dc.format.mediumelectronicen
dc.format.mimetypeapplication/pdf
dc.language.isoen_US
dc.publisherTexas A&M University
dc.subjectprolidaseen
dc.titleCatalytic properties and mechanism studies of the PepQ prolidase from Escherichia colien
dc.typeBooken
dc.typeThesisen
thesis.degree.departmentChemistryen
thesis.degree.disciplineChemistryen
thesis.degree.grantorTexas A&M Universityen
thesis.degree.nameMaster of Scienceen
thesis.degree.levelMastersen
dc.contributor.committeeMemberLindahl, Paul A
dc.contributor.committeeMemberWatanabe, Coran M
dc.type.genreElectronic Thesisen
dc.type.materialtexten
dc.format.digitalOriginborn digitalen


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