File S1. All regions of WCC enrichment at p<0.001 and z score >3.09

N. crassa

# of

coding
  contig                  start nt    reads    z score    promoter                           region         intergenic 	

chrVII_contig7.10	277601		738		45.66		frq		
chrVI_contig7.12	422401		696		42.93		vvd		
chrI_contig7.2	298501		657		40.40		cry		
chrII_contig7.57	14601		415		24.68		bli-4		
chrII_contig7.57	14651		415		24.68		bli-4		
chrI_contig7.9	872451		387		22.87		os-4/NCU03072		
chrVII_contig7.10	272251		378		22.28		frq AS/NCU02264		
chrIV_contig7.43	2901		353.5		20.69		none		
chrV_contig7.13	558401		340		19.81		sah-1		
chrV_contig7.48	193601		321		18.58		NCU10063		
chrVI_contig7.12	623601		298		17.09		NCU04021		
chrII_contig7.30	321751		267		15.07					NCU05448/NCU05452	
chrII_contig7.30	321801		267		15.07					NCU05448/NCU05452	
chrVI_contig7.22	197301		262		14.75		NCU05594				
chrI_contig7.7	782201		253		14.17		NCU02800/NCU02801				
chrI_contig7.7	782251		253		14.17		NCU02800/NCU02801				
chrVII_contig7.10	644051		245		13.65		wc-1				
chrV_contig7.13	125751		236		13.06		NCU04295				
chrIII_contig7.45	138451		235		13.00		NCU07541				
chrI_contig7.2	196651		230		12.67		al-1				
chrVI_contig7.12	426151		226		12.41		NCU03968				
chrVII_contig7.21	6451		210		11.37		NCU11300/NCU06017				
chrII_contig7.81	66601		203		10.92		NCU09615				
chrI_contig7.2	305951		200		10.72		al-2/NCU00584				
chrIII_contig7.42	197851		196.5		10.50		NCU05721				
chrIII_contig7.17	577101		195		10.40		NCU11290				
chrII_contig7.8	726901		189		10.01		NCU03523				
chrI_contig7.29	29051		187.5		9.91		tca-12				
chrI_contig7.6	187501		186		9.82		NCU02715				
chrI_contig7.59	47101		182		9.56		nit-2				
chrI_contig7.9	588451		174		9.04		NCU03151/2				
chrVI_contig7.4	336501		171		8.84		NCU05964				
chrII_contig7.71	11501		170.5		8.81		NCU09335				
chrI_contig7.3	527601		170		8.78		NCU01997/ prr-5				
chrV_contig7.88	31301		170		8.78		NCU09829				
chrVII_contig7.32	137801		165		8.45		NCU06915				
chrVI_contig7.12	100051		165		8.45					NCU03865	
chrIV_contig7.20	231951		164		8.39		NCU04452				
chrVII_contig7.66	38801		163		8.32		NCU11395				
chrV_contig7.24	465351		163		8.32		NCU04568				
chrV_contig7.15	93601		162		8.27		NCU01242/NCU01243				
chrII_contig7.30	45851		161		8.19		NCU05340/NCU05338				
chrIV_contig7.26	353451		158		8.00		crf5-1/NCU06307				
chrI_contig7.3	66151		158		8.00		NCU01871				
chrIII_contig7.1	760551		156		7.87		nst-5/NCU00202				
chrIII_contig7.1	798051		154		7.74		cdc-27/NCU00216				
chrII_contig7.54	127201		150		7.48		hsf-2				
chrV_contig7.13	413701		149		7.41		tre-2				
chrVI_contig7.12	419251		147		7.28					NCU03967/vvd	
chrI_contig7.7	709901		145		7.15		NCU02819				
chrII_contig7.5	957551		140		6.83		NCU01810				
chrIV_contig7.28	158751		137		6.63		NCU06554/NCU06553				
chrVI_contig7.12	105701		134		6.44		NCU03866				
chrIII_contig7.45	136901		134		6.44		NCU07541				

chrI_contig7.38	75551	132	6.31	msh-1		
chrIV_contig7.53	146651	132	6.31	mus-51		
chrV_contig7.88	33801	131	6.24	NCU09830		
chrII_contig7.8	32551	130	6.18		NCU03332		
chrII_contig7.8	32601	130	6.18		NCU03332		
chrVI_contig7.16	124301	128	6.05	NCU04718			
chrIV_contig7.60	36201	126	5.89	rhp-55			
chrI_contig7.3	204101	125	5.85	NCU01911			
chrI_contig7.58	124101	125	5.85	NCU08606			
chrVI_contig7.12	570251	125	5.82	prk-7/ylo-1			
chrI_contig7.6	191451	124	5.79	csp-1			
chrV_contig7.13	559551	124	5.79	sah-1			
chrII_contig7.5	458101	123	5.69	rpn-4			
chrIV_contig7.60	44551	122	5.66	cre-1			
chrIV_contig7.47	38451	122	5.66	NCU07723			
chrVI_contig7.4	622851	121	5.59	NCU05143			
chrV_contig7.37	302351	121	5.59	NCU07161/spr-7			
chrVI_contig7.12	428501	121	5.59			NCU03968/NCU03969	
chrVI_contig7.12	428551	121	5.59			NCU03968/NCU03969	
chrIII_contig7.1	1341751	119	5.46	NCU00359/NCU00360			
chrI_contig7.2	1571851	118	5.40	NCU00939			
chrV_contig7.41	284101	118	5.40	NCU09534/NCU09535			
chrII_contig7.30	124951	116	5.27	NCU05373/NCU05375			
chrI_contig7.58	65451	115.5	5.24	phr			
chrI_contig7.38	129051	115	5.20	adv-1			
chrIII_contig7.1	389051	115	5.20	bek-1			
chrII_contig7.71	94351	115	5.20	NCU09350/NCU09352			
chrIII_contig7.27	114951	114	5.14	NCU06428/NCU06429			
chrI_contig7.29	173801	114	5.14			cr-1/NCU07378	
chrI_contig7.29	173851	114	5.14			cr-1/NCU07378	
chrV_contig7.14	35001	113	5.07			NCU01417/10417	
chrIII_contig7.27	117251	112.5	5.04	NCU06428/NCU06429			
chrI_contig7.70	27551	112	5.01	dtn-1			
chrV_contig7.13	195601	112	5.01	NCU04276 PP			
chrV_contig7.46	66501	112	5.01	NCU07749 PP			
chrII_contig7.44	178051	112	5.01	NCU08432			
chrVII_contig7.10	11851	111.5	4.98	NCU02190			
chrIV_contig7.20	108001	111	4.94			NCU04491/NCU04492	
chrIII_contig7.1	246551	110	4.88	NCU00062/NCU00064			
chrI_contig7.70	17201	110	4.88	NCU09233/con-8			
chrV_contig7.64	105751	109	4.82	ccg-13			
chrI_contig7.56	154501	109	4.82	NCU08092/3			
chrI_contig7.2	865301	108	4.75	NCU00740/1 (PP/CH)			
chrI_contig7.3	43851	108	4.75	NCU01862			
chrVI_contig7.4	527951	108	4.75	NCU05912			
chrIII_contig7.27	73901	108	4.75	NCU06421			
chrI_contig7.6	588401	107.5	4.72	NCU02609			
chrII_contig7.8	234701	107.5	4.72	NCU03388			
chrIV_contig7.19	423301	107	4.69	erg-11			
chrI_contig7.38	79101	107	4.69	gh38-1			
chrIV_contig7.47	109401	107	4.69	NCU07705			
chrVII_contig7.52	181301	107	4.69	NCU08167			
chrVII_contig7.52	181401	107	4.69	NCU08167			
chrIV_contig7.35	295601	107	4.69	os-2			
chrI_contig7.3	253551	106	4.62	NCU01924			
chrV_contig7.64	3801	106	4.62	NCU08883 PP			
chrVI_contig7.4	188751	106	4.62	ubi			
chrIV_contig7.36	107451	105.5	4.59	NCU07316			

chrI_contig7.9	789801	105	4.56	gh15-1/NCU03097		
chrIV_contig7.19	233651	105	4.56	NCU05229 PP		
chrVI_contig7.22	361901	105	4.56	NCU05547 PP		
chrIV_contig7.60	54451	104	4.49	bdp-1		
chrVI_contig7.4	697401	104	4.49	NCU05126		
chrV_contig7.15	645401	103	4.43	NCU01060/gh47-3		
chrI_contig7.7	958851	103	4.43	NCU02771/NCU02770		
chrII_contig7.30	198151	103	4.43	NCU05394/NCU05395		
chrVII_contig7.32	269251	103	4.43	NCU06874		
chrIV_contig7.60	29501	103	4.43	NCU08805 PP		
chrV_contig7.13	158501	103	4.43			nup-21/NCU04287	
chrIV_contig7.19	504651	103	4.43		NCU05300		
chrII_contig7.30	115401	103	4.43			NCU05370/NCU05373	
chrIII_contig7.45	156851	103	4.43		NCU07545		
chrIV_contig7.18	636151	102	4.36	NCU04983			
contig7.50	16701	102	4.36	none			
contig7.50	173051	102	4.36	none			
chrII_contig7.5	150201	102	4.36		NCU01536		
chrII_contig7.5	408551	102	4.36			NCU10404/NCU01632	
chrIII_contig7.40	225051	101	4.30	csb/pan-3			
chrIII_contig7.40	225101	101	4.30	csb/pan-3			
chrV_contig7.14	385951	101	4.30	gt41-1			
chrI_contig7.2	886551	101	4.30	NCU00746 PP			
chrII_contig7.5	864451	101	4.30	NCU01788			
chrIV_contig7.28	343501	101	4.30	NCU06610 CH			
chrIV_contig7.18	528301	100.5	4.26	NCU04974			
chrI_contig7.3	440251	100	4.23	NCU01971/NCU01972 (CH/CH)			
chrIV_contig7.35	281101	100	4.23	NCU07022			
chrIII_contig7.1	272401	100	4.23		NCU00069		
chrII_contig7.44	213101	100	4.23			NCU08442/NCU08443	
chrIII_contig7.1	1498701	99	4.17	NCU00401			
chrI_contig7.9	422801	99	4.17	NCU03202/NCU03203			
chrV_contig7.37	189251	99	4.17	NCU07193			
chrIV_contig7.28	76501	99	4.17	NCU11321			
chrI_contig7.3	198651	99	4.17		NCU01910		
chrV_contig7.48	2401	98.5	4.13			NCU10077	
chrI_contig7.9	540701	98	4.10	NCU03169			
chrVI_contig7.4	919501	98	4.10	NCU05059			
chrV_contig7.31	302451	98	4.10	NCU06655			
chrV_contig7.46	68601	98	4.10	NCU07750 PP			
chrV_contig7.11	454151	98	4.10	NCU11260			
contig7.50	26201	98	4.10	none			
chrI_contig7.3	834601	98	4.10			NCU02081/NCU02082	
chrVI_contig7.16	213751	98	4.10			mus-50/NCU04734	
chrI_contig7.3	1090251	97.5	4.07	NCU02122/NCU02123			
chrIV_contig7.20	76201	97	4.04	NCU04502			
chrV_contig7.88	3851	97	4.04	NCU09823			
contig7.102	21901	97	4.04	none			
chrV_contig7.48	114651	97	4.04		NCU08956		
chrII_contig7.54	160701	97	4.04		NCU08472		
chrVII_contig7.32	225401	96	3.97	NCU06888 PP			
chrIV_contig7.19	311251	96	3.97	NCU10101 PP			
chrV_contig7.15	391951	96	3.97	sub-1			
chrI_contig7.6	628301	96	3.97		NCU02594		
chrVII_contig7.76	25401	96	3.97		NCU09424		
chrI_contig7.9	397351	95.5	3.94			NCU03213/NCU03214	
chrVII_contig7.23	38351	95	3.91	NCU05897			
chrVII_contig7.23	38401	95	3.91	NCU05897			

chrV_contig7.37	118001	95	3.91	NCU07221		
chrIII_contig7.74	3651	95	3.91	NCU09496		
chrI_contig7.9	485351	95	3.91	NCU10621		
chrI_contig7.6	632901	95	3.91			NCU02593/NCU02592	
chrI_contig7.7	813651	95	3.91			hda-2/NCU10897	
chrIV_contig7.36	265951	95	3.91			NCU07276/NCU07277	
chrV_contig7.37	106051	95	3.91		NCU07226		
chrVI_contig7.16	504001	94.5	3.87	mrp-7			
contig7.117	4401	94.5	3.87	none			
chrIV_contig7.26	93301	94.5	3.87	trm-42			
chrV_contig7.14	252151	94.5	3.87			NCU01361/NCU01362	
chrII_contig7.33	110651	94.5	3.87				
chrII_contig7.5	124151	94	3.84	hda-1/gpd-1 (ccg-7)			
chrIII_contig7.1	884851	94	3.84	NCU00236			
chrII_contig7.5	684251	94	3.84	NCU01726/NCU01728			
chrI_contig7.6	595851	94	3.84	NCU02606			
chrI_contig7.9	57001	94	3.84	NCU03306/nca-1			
chrV_contig7.11	463801	94	3.84	NCU03706			
chrV_contig7.11	566101	94	3.84	NCU03741/NCU03742			
chrVI_contig7.12	101501	94	3.84	NCU03865			
chrV_contig7.13	759751	94	3.84	NCU04118			
chrV_contig7.24	178651	94	3.84	NCU04639 PP			
chrVI_contig7.16	338901	94	3.84	NCU04765 PP			
chrVI_contig7.16	653151	94	3.84	NCU04844 CH			
chrIV_contig7.43	236651	94	3.84	NCU07600 PP			
chrIII_contig7.40	241501	94	3.84	NCU07834			
chrIII_contig7.40	81501	94	3.84	NCU07869			
chrIII_contig7.17	483401	94	3.84	NCU08797 PP			
chrIII_contig7.74	62001	94	3.84	NCU09509/NCU09510			
chrV_contig7.11	460501	94	3.84			NCU11260/NCU03706	
chrV_contig7.15	375951	94	3.84			NCU01156/sub-1	
chrI_contig7.39	235701	94	3.84			NCU07447/NCU07448	
chrIV_contig7.36	188951	93.5	3.81	asn-2			
chrVI_contig7.16	279801	93.5	3.81	NCU04748			
chrIV_contig7.18	503751	93.5	3.81	NCU04969			
chrVI_contig7.12	21051	93	3.78	NCU03847			
chrVI_contig7.12	738451	93	3.78	NCU04055/NCU04056 PPs			
chrIV_contig7.19	542251	93	3.78	NCU05309/NCU05310			
chrIV_contig7.26	95451	93	3.78	trm-42			
chrI_contig7.2	180951	93	3.78		NCU00549		
chrI_contig7.7	42651	93	3.78			NCU03043/msp-22	
chrII_contig7.8	793201	93	3.78		un-24		
chrV_contig7.14	149651	93	3.78		NCU01389		
chrV_contig7.14	149701	93	3.78		NCU01389		
chrV_contig7.37	197851	93	3.78			NCU07191/NCU07192	
chrV_contig7.46	191651	93	3.78			NCU07786/ccg-14	
chrII_contig7.68	33851	92.5	3.74	none			
chrV_contig7.11	35901	92	3.71	NCU03586			
chrVI_contig7.4	528101	92	3.71	NCU05912			
chrIII_contig7.25	372151	92	3.71	NCU06183			
chrIV_contig7.28	101201	92	3.71	NCU06534/NCU06536			
chrI_contig7.92	2201	92	3.71	NCU09900 PP			
contig7.215	6301	92	3.71	none			
contig7.215	6351	92	3.71	none			
chrVI_contig7.4	392551	92	3.71			NCU05948/NCU05949	
chrV_contig7.14	18951	92	3.71			mbf-1/NCU01421	
chrVI_contig7.16	299301	92	3.71			nuo11.6/ilv-6	
chrV_contig7.24	117351	92	3.71		NCU10841		

chrII_contig7.33	169551	92	3.71		NCU06785		
chrII_contig7.8	655651	91.5	3.68	NCU03505			
chrI_contig7.2	951351	91	3.65	cea-4			
chrI_contig7.2	675201	91	3.65	ck-1			
chrV_contig7.11	293651	91	3.65	gh63-1			
chrI_contig7.6	491151	91	3.65	msr-7/ad-5			
chrI_contig7.7	458601	91	3.65	NCU02901 PP			
chrVI_contig7.4	1058701	91	3.65	NCU05025			
chrI_contig7.38	6251	91	3.65	NCU07425			
chrIV_contig7.43	93351	91	3.65	NCU07635 PP			
chrVII_contig7.66	94351	91	3.65	NCU09036/7			
contig7.121	3901	91	3.65	none			
chrII_contig7.8	482501	91	3.65	vph-1			
chrII_contig7.8	482551	91	3.65	vph-1			
chrI_contig7.2	205251	91	3.65		hom-1		
chrI_contig7.7	226251	91	3.65		NCU02979		
chrII_contig7.8	180951	91	3.65		NCU03375		
chrIII_contig7.27	236951	91	3.65			NCU06467/NCU06468	
chrII_contig7.33	42951	91	3.65			NCU06748/mrp-19	
chrIV_contig7.35	180151	91	3.65			NCU07000/NCU07001	
chrI_contig7.39	206901	91	3.65			prm-1/chi-3	
chrI_contig7.39	206951	91	3.65			prm-1/chi-3	
contig7.61	81651	91	3.65			NCU05746	
chrVI_contig7.16	202151	90.5	3.61	sah-2			
chrIII_contig7.42	65451	90	3.58	gh16-5			
chrV_contig7.14	477201	90	3.58	NCU01292/NCU01294			
chrI_contig7.6	354251	90	3.58	NCU02665			
chrIV_contig7.18	616501	90	3.58	NCU04982			
chrIII_contig7.42	75851	90	3.58	NCU05688 PP			
chrVII_contig7.23	177401	90	3.58	NCU05854 CH/NCU05855			
chrI_contig7.29	70651	90	3.58	NCU08348			
chrIII_contig7.69	113901	90	3.58	NCU09156			
chrII_contig7.71	65601	90	3.58	nmt-1			
contig7.61	15301	90	3.58	none			
chrIV_contig7.47	25201	90	3.58	sre			
chrIV_contig7.47	25251	90	3.58	sre			
chrI_contig7.6	457751	90	3.58		arg-1		
chrI_contig7.9	642501	90	3.58		gh47-2		
chrIV_contig7.19	567051	90	3.58			NCU05316/gh18-6	
chrIII_contig7.1	753651	89.5	3.55	NCU00201			
chrIII_contig7.1	753701	89.5	3.55	NCU00201			
chrV_contig7.15	591401	89	3.52	NCU01078			
chrV_contig7.15	591451	89	3.52	NCU01078			
chrIV_contig7.19	380451	89	3.52	NCU05267			
chrIII_contig7.25	308301	89	3.52	NCU06202			
chrV_contig7.31	156151	89	3.52	NCU06691 PP			
chrIII_contig7.40	173001	89	3.52	NCU07846			
chrIII_contig7.17	429401	89	3.52	NCU08533 PP			
chrI_contig7.29	264951	89	3.52	NCU09141			
chrI_contig7.65	50851	89	3.52	NCU09201			
chrV_contig7.13	537801	89	3.52	prk-1			
chrIV_contig7.53	173351	89	3.52	pyr-3/NCU08283			
chrIV_contig7.53	173451	89	3.52	pyr-3/NCU08283			
chrI_contig7.9	337251	89	3.52	trm-24			
chrIII_contig7.1	788001	89	3.52		mrp-35		
chrI_contig7.2	344551	89	3.52		NCU00596		
chrI_contig7.2	679751	89	3.52		NCU00687/8		
chrI_contig7.2	679801	89	3.52		NCU00687/8		

chrII_contig7.5	320601	89	3.52			NCU01598/NCU01599	
chrV_contig7.11	343051	89	3.52			NCU11259/03678	
chrV_contig7.13	264051	89	3.52		NCU04260		
chrIII_contig7.17	81701	89	3.52			ptr-1/NCU08220	
chrIII_contig7.17	81751	89	3.52			ptr-1/NCU08220	
chrIII_contig7.25	204401	89	3.52			NCU06230/1	
chrIV_contig7.36	100951	89	3.52		NCU07318		
chrIV_contig7.51	73401	89	3.52		NCU07995		
chrI_contig7.56	92651	89	3.52			cyt-21/gh16-10	
chrVII_contig7.66	114651	89	3.52		NCU09031		
chrII_contig7.30	35351	88.5	3.48	none			
contig7.50	100501	88.5	3.48	none			
chrIII_contig7.1	1457551	88	3.45	NCU00392			
chrI_contig7.2	596851	88	3.45	NCU00667/NCU00668			
chrVI_contig7.4	983051	88	3.45	NCU05042/NCU05043			
chrIV_contig7.28	277301	88	3.45	NCU06591			
chrIV_contig7.28	299251	88	3.45	NCU06597 PP			
chrI_contig7.29	277901	88	3.45	NCU09136 CH			
chrI_contig7.6	195701	88	3.45			NCU02712/NCU02713	
chrI_contig7.7	50101	88	3.45			NCU03043/msp-22	
chrI_contig7.9	480751	88	3.45			NCU03186/NCU10621	
chrI_contig7.29	237101	88	3.45			NCU08391/NCU08392	
chrI_contig7.70	13801	88	3.45			NCU09232/NCU09233	
chrIII_contig7.95	22151	88	3.45		NCU05660		
contig7.98	13851	88	3.45		NCU09994		
chrII_contig7.54	184051	87	3.39	eas			
chrVI_contig7.34	283151	87	3.39	gh47-5			
chrIII_contig7.1	1039001	87	3.39	NCU00275/mip-1			
chrI_contig7.2	1292801	87	3.39	NCU00857/NCU00859			
chrIV_contig7.49	82101	87	3.39	NCU07916			
chrV_contig7.63	14251	87	3.39	NCU08847 PP			
chrV_contig7.41	252351	87	3.39	NCU09541 CH			
chrV_contig7.80	41601	87	3.39	NCU09678/NCU09679			
chrII_contig7.71	67401	87	3.39	nup-31			
chrIII_contig7.1	430201	87	3.39		NCU00113		
chrV_contig7.11	391651	87	3.39			NCU03689/NCU03690	
chrV_contig7.13	718501	87	3.39			NCU04130/NCU04131	
chrIV_contig7.26	281451	87	3.39			NCU06328/NCU06329	
chrIV_contig7.35	101251	87	3.39			NCU06980/NCU06981	
chrIV_contig7.51	113301	87	3.39			vsp-2/NCU08002	
chrIV_contig7.51	113351	87	3.39			vsp-2/NCU08002	
chrII_contig7.68	75751	87	3.39		NCU05238		
chrIV_contig7.18	623551	86.5	3.35	NCU04983			
chrIV_contig7.26	379351	86.5	3.35	NCU06298			
chrI_contig7.2	476101	86	3.32	crf9-1			
chrV_contig7.14	642901	86	3.32	mrp-33/ad-6			
chrI_contig7.3	127001	86	3.32	NCU01889/NCU01891 PPs			
chrVI_contig7.16	596851	86	3.32	NCU04830			
chrIV_contig7.18	621051	86	3.32	NCU04983			
chrVI_contig7.4	675201	86	3.32	NCU05131 PP			
chrVI_contig7.4	200401	86	3.32	NCU05994			
chrV_contig7.46	165551	86	3.32	NCU07778			
chrV_contig7.46	165601	86	3.32	NCU07778			
chrV_contig7.80	57701	86	3.32	NCU09685 CH			
chrIV_contig7.83	8851	86	3.32	NCU09727			
contig7.90	39351	86	3.32	NCU09881/NCU09882			
chrIII_contig7.42	157001	86	3.32	NCU10387			
chrII_contig7.68	20901	86	3.32	none			

chrI_contig7.6	414751	86	3.32	rpn-5		
chrI_contig7.3	949151	86	3.32	vad-2/NCU02095		
chrIII_contig7.1	478101	86	3.32		NCU00125		
chrI_contig7.2	682101	86	3.32		NCU00688		
chrII_contig7.5	969801	86	3.32		NCU01814		
chrII_contig7.5	969851	86	3.32		NCU01814		
chrVI_contig7.12	808401	86	3.32			nuo30.4/NCU04075	
chrV_contig7.24	134551	86	3.32			NCU04652/NCU04653	
chrIII_contig7.27	159451	86	3.32			NCU06443/NCU06444	
chrIV_contig7.53	98101	86	3.32			NCU08304/NCU08305	
chrVI_contig7.16	366901	85.5	3.29	NCU04770			
chrII_contig7.30	174801	85.5	3.29	NCU05388 PP			
chrI_contig7.29	197051	85.5	3.29			NCU08381/NCU08382	
chrI_contig7.9	132701	85	3.26	efr-3			
chrIII_contig7.1	1555501	85	3.26	NCU00420 CH			
chrI_contig7.2	1050351	85	3.26	NCU00786/NCU00787			
chrII_contig7.5	503301	85	3.26	NCU01653/NCU01654			
chrI_contig7.7	89101	85	3.26	NCU03032			
chrI_contig7.7	77601	85	3.26	NCU03035			
chrI_contig7.9	175701	85	3.26	NCU03273/NCU03271			
chrV_contig7.13	308551	85	3.26	NCU04249 CH			
chrVI_contig7.22	315201	85	3.26	NCU05563 PP			
chrIII_contig7.42	251401	85	3.26	NCU05737			
chrI_contig7.38	262351	85	3.26	NCU07359 CH			
chrIV_contig7.53	71201	85	3.26	NCU08314 PP			
chrV_contig7.48	160151	85	3.26	NCU08966 PP			
chrVI_contig7.22	295251	85	3.26	NCU10718 PP			
chrIII_contig7.1	94501	85	3.26	NCU10878			
chrI_contig7.2	596801	85	3.26	vma-11/NCU00668			
chrIII_contig7.1	787651	85	3.26			NCU00210/mrp-35	
chrIII_contig7.1	1517651	85	3.26		NCU00406		
chrI_contig7.2	607451	85	3.26		nuo9.5		
chrVI_contig7.4	146801	85	3.26			gh71-2/NCU06009	
chrI_contig7.9	574401	85	3.26		NCU03155		
chrVII_contig7.10	524351	85	3.26		NCU02332		
chrIV_contig7.19	247051	85	3.26			NCU05232/NCU05233	
chrIII_contig7.25	145901	85	3.26			NCU06248/NCU06249	
chrV_contig7.41	137701	85	3.26			NCU01465/NCU01466	
chrV_contig7.41	137751	85	3.26			NCU01465/NCU01466	
chrIII_contig7.45	14301	85	3.26		NCU07513		
chrII_contig7.54	92151	85	3.26			NCU08491/NCU08492	
chrI_contig7.9	498501	84.5	3.22	NCU03184			
chrVII_contig7.55	136951	84.5	3.22	none			
chrI_contig7.7	887601	84.5	3.22		NCU02791		
chrI_contig7.3	909951	84	3.19	gh47-7			
chrI_contig7.6	59151	84	3.19	NCU02749			
chrI_contig7.9	752101	84	3.19	NCU03104			
chrII_contig7.8	463451	84	3.19	NCU03458			
chrV_contig7.11	604351	84	3.19	NCU03752	ccg-1		
chrVI_contig7.12	34401	84	3.19	NCU03849/NCU03850			
chrIII_contig7.27	134651	84	3.19	NCU06435/NCU06436			
chrIII_contig7.27	300201	84	3.19	NCU06483			
chrI_contig7.38	298401	84	3.19	NCU07353 PP			
chrIV_contig7.51	99701	84	3.19	NCU08000			
chrII_contig7.54	178901	84	3.19	NCU08459 PP			
chrIII_contig7.17	561501	84	3.19	NCU08779			
chrI_contig7.59	82301	84	3.19	NCU09078			
chrII_contig7.5	58801	84	3.19	NCU1504			

chrVI_contig7.16	608301	84	3.19	phy-1			
chrIII_contig7.1	14551	84	3.19		NCU00005		
chrIII_contig7.1	541901	84	3.19			NCU00142/NCU10086	
chrII_contig7.5	426001	84	3.19			hH4-1	
chrII_contig7.5	537451	84	3.19			NCU01660/NCU01664	
chrI_contig7.6	618951	84	3.19			NCU02598/NCU02597	
chrI_contig7.7	569701	84	3.19		NCU02869		
chrI_contig7.9	705951	84	3.19		NCU03116		
chrV_contig7.11	120551	84	3.19			NCU03604/NCU03605	
chrV_contig7.11	120601	84	3.19			NCU03604/NCU03605	
chrV_contig7.15	303551	84	3.19			NCU01176/fpp	
chrIII_contig7.27	325101	84	3.19			NCU06487/crf3-1	
chrII_contig7.33	141051	84	3.19		NCU06775		
chrII_contig7.33	282751	84	3.19		NCU06834		
chrIV_contig7.47	73051	84	3.19			trm-19/NCU07710	
chrI_contig7.58	124151	120	5.53				
contig7.61	62301	84	3.19		NCU05743		
chrII_contig7.77	31401	84	3.19			NCU09489/NCU09490	
chrI_contig7.39	156201	83.5	3.16	NCU07475 PP			
chrV_contig7.13	685501	83.5	3.16			NCU04143/hsp-80	
chrVII_contig7.23	393251	83.5	3.16			NCU05793/NCU05794	
chrII_contig7.54	54151	83.5	3.16			crp-14/NCU08501	
chrIV_contig7.19	261601	83	3.13	cys-4			
chrIII_contig7.1	48451	83	3.13	NCU00011/NCU00014			
chrIII_contig7.1	48501	83	3.13	NCU00011/NCU00014			
chrV_contig7.15	503051	83	3.13	NCU01107			
chrI_contig7.7	950301	83	3.13	NCU02773/NCU02774 PPs			
chrI_contig7.7	891251	83	3.13	NCU02790 CH			
chrI_contig7.9	916451	83	3.13	NCU03064/NCU03065			
chrI_contig7.9	916551	83	3.13	NCU03064/NCU03065			
chrII_contig7.8	425801	83	3.13	NCU03446/NCU03448 PPs			
chrIV_contig7.20	139401	83	3.13	NCU04479/NCU04480			
chrVI_contig7.16	554401	83	3.13	NCU04820 PP			
chrVI_contig7.4	950051	83	3.13	NCU05048 PP			
chrIII_contig7.42	238301	83	3.13	NCU05732 PP			
chrVII_contig7.21	260701	83	3.13	NCU06095			
chrIII_contig7.25	207201	83	3.13	NCU06230			
chrIII_contig7.25	198351	83	3.13	NCU06231			
chrIV_contig7.26	124801	83	3.13	NCU06375			
chrIV_contig7.49	1151	83	3.13	NCU07891			
chrII_contig7.57	172301	83	3.13	NCU08748/NCU08749			
chrI_contig7.72	24651	83	3.13	NCU09310			
chrIV_contig7.79	31051	83	3.13	NCU09657			
chrIV_contig7.79	31101	83	3.13	NCU09657			
contig7.93	22301	83	3.13	NCU09906			
chrV_contig7.14	618551	83	3.13	NCU10457 PP			
chrIV_contig7.83	52001	83	3.13	xdh-2			
chrI_contig7.2	526051	83	3.13			NCU10132/NCU00648	
chrI_contig7.3	94401	83	3.13		NCU01881		
chrVI_contig7.4	249751	83	3.13			coq-3/NCU05981	
chrVI_contig7.4	258751	83	3.13		NCU05978		
chrII_contig7.5	215351	83	3.13		NCU01557		
chrII_contig7.5	416751	83	3.13		NCU01633		
chrV_contig7.11	372201	83	3.13		tah-3		
chrVI_contig7.12	365701	83	3.13		NCU03949		
chrV_contig7.13	225401	83	3.13		apr-6		
chrIII_contig7.17	521851	83	3.13		cat-1		
chrVII_contig7.21	354151	83	3.13		NCU06123		

chrII_contig7.33	46651	83	3.13		NCU06751		
chrII_contig7.33	127751	83	3.13		NCU06769		
chrIII_contig7.69	19301	83	3.13		cyp450-24		
chrIV_contig7.83	24701	83	3.13			NCU09729/NCU09730	
chrIV_contig7.18	405751	82.5	3.09	gh16-4			
chrV_contig7.14	105101	82.5	3.09	NCU01401			
chrII_contig7.33	47451	82.5	3.09	NCU06751			
chrI_contig7.39	32401	82.5	3.09	NCU07504			
chrVII_contig7.52	161651	82.5	3.09	NCU08159			
chrII_contig7.71	32351	82.5	3.09	NCU09336			
chrI_contig7.9	396301	82.5	3.09			NCU03213/NCU03214	
chrIII_contig7.40	283001	82.5	3.09		ncw-3		
contig7.61	56601	82.5	3.09			NCU05742	

See Experimental Procedures for details. PP denotes predicted protein, CH denotes conserved hypothetical protein. “Promoter” denotes WC-2 binding sites close to known or predicted transcriptional start sites, “coding region” denotes peaks found only in coding regions of genes but not also in the promoter, and “intergenic” denotes peaks that are in gene-poor non-coding regions. A z score of 3.09 or greater means significance at p<0.001